Circularin A

Accession: BAC164

Default view

Bacteriocin: Circularin A

Accession: BAC164

Classification

Class: ~~Unclassified~~

Genetics

Gene: GK0719

Producer and target organisms

Producer Organism: Geobacillus kaustophilus [Gram-positive]

Taxonomy: BacteriaFirmicutesBacillalesBacillaceaeGeobacillus

Target organisms~~Unavailable data~~

Uniprot and PDB links

UniProt Entry: Q5L226

PDB Entry~~Unknown~~

[Ref. 1] | View abstract | Export citation

NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].STRAIN=HTA426
PubMed=15576355;DOI=10.1093/nar/gkh970
Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H., Matsui S., Uchiyama I.
"Thermoadaptation trait revealed by the genome sequence ofthermophilic Geobacillus kaustophilus", Nucleic Acids Res. 32:6292-6303(2004

Protein sequence

........10 ........20 ........30 ........40 ........50 ........60 ........70 ........80
| | | | | | | |
MSLLALVAGT LGVSQSIATT VVSIVLTGST LISIILGITA ILSGGVDAIL EIGWSAFVAT VKKIVAERGK AAAIAW

Wheel representation

Composition

Amino acid	Count	Percent
A	12	15.79 %
C	0	0.00 %
D	1	1.32 %
E	2	2.63 %
F	1	1.32 %
G	8	10.53 %
H	0	0.00 %
I	11	14.47 %
K	3	3.95 %
L	9	11.84 %
M	1	1.32 %
N	0	0.00 %
P	0	0.00 %
Q	1	1.32 %
R	1	1.32 %
S	8	10.53 %
T	7	9.21 %
V	9	11.84 %
W	2	2.63 %
Y	0	0.00 %

Hydrophobicity

Composition

Formula	C₃₄₈ H₅₈₉ N₈₅ O₉₉ S₁
Absent amino acids	CHNPY
Common amino acids	AI
Mass (Da)	7599.42
Net charge	+1
Isoelectric point	9.44
Basic residues	4
Acidic residues	3
Hydrophobic residues	44
Polar residues	23
Aliphatic residues	29
Tiny residues	28
Boman Index	69.35
Hydropathy Index	1.33
Aliphatic Index	152.76
Instability Index	26.06 (stable)
Half Life	Mammalian : 30 hour Yeast : >20 hour E. coli : >10 hour
Extinction Coefficient	11000 M^-1 cm^-1
Absorbance 280nm	146.67