Bacteriocin: Trifolitoxin
Accession: BAC154
Classification
Class: Unclassified
Genetics
Gene: tfxA
Producer and target organisms
Producer Organism: Rhizobium leguminosarum bv. trifolii [Gram-negative]
Taxonomy: Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Rhizobium/Agrobacterium group
Rhizobium
Target organismsUnavailable data
Uniprot and PDB links
UniProt Entry: P42723
PDB EntryUnknown
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Gene structure
| Gene id | Name | Description | Location |
| BACGene686 | tfxA | trifolitoxin label:precursor | 597..725 |
| BACGene687 | tfxB | required for processing of trifolitoxin precursor; putative | 794..1915 |
| BACGene688 | tfxC | processes trifolitoxin precursor; putative | 1908..2978 |
| BACGene689 | tfxD | processes trifolitoxin peptide precursor; putative | 2982..4232 |
| BACGene690 | tfxE | unknown precursor; putative | 4213..4971 |
| BACGene691 | tfxF | processes trifolitoxin peptide precursor; putative | 4968..5744 |
| BACGene692 | tfxG | unknown precursor; putative | 5996..6781 |
Protein sequence
| ........10 ........20 | | DIGGSRQGCV A |
Wheel representation
Protein sequence annotations
| Feature | Position(s) | Length | Description |
| PEPTIDE | 1↔11 | 11 | Trifolitoxin. Feature identifier = PRO_0000002779. |
| Modified residue | 7 | Glutamine derivative. | |
| Cross-link | 8↔9 | 2 | Thiazole-4-carboxylic acid (Gly-Cys). |
Composition
| Amino acid | Count | Percent |
|---|---|---|
| A | 1 | 9.09 % |
| C | 1 | 9.09 % |
| D | 1 | 9.09 % |
| E | 0 | 0.00 % |
| F | 0 | 0.00 % |
| G | 3 | 27.27 % |
| H | 0 | 0.00 % |
| I | 1 | 9.09 % |
| K | 0 | 0.00 % |
| L | 0 | 0.00 % |
| M | 0 | 0.00 % |
| N | 0 | 0.00 % |
| P | 0 | 0.00 % |
| Q | 1 | 9.09 % |
| R | 1 | 9.09 % |
| S | 1 | 9.09 % |
| T | 0 | 0.00 % |
| V | 1 | 9.09 % |
| W | 0 | 0.00 % |
| Y | 0 | 0.00 % |
Hydrophobicity
Composition
| Formula | C41
H71
N15
O16
S1 |
| Absent amino acids | EFHKLMNPTWY |
| Common amino acids | G |
| Mass (Da) | 1080.35 |
| Net charge | 0 |
| Isoelectric point | 6.16 |
| Basic residues | 1 |
| Acidic residues | 1 |
| Hydrophobic residues | 3 |
| Polar residues | 5 |
| Aliphatic residues | 2 |
| Tiny residues | 5 |
| Boman Index | -17.71 |
| Hydropathy Index | -0.05 |
| Aliphatic Index | 70.91 |
| Instability Index | 48.47 (unstable) |
| Half Life |
Mammalian : 1.1 hour Yeast : 3 min E. coli : >10 hour |
| Extinction Coefficient | 0 M-1 cm-1 |
| Absorbance 280nm | 0 |
