Bacteriocin: Pisciocin V1a

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Bacteriocin: Pisciocin V1a

Accession: BAC082

Classification
Class: class IIa
Genetics
Gene: Pisciocin V1b
Uniprot and PDB links

UniProt Entry: No entry found

PDB EntryUnknown

NUCLEOTIDE SEQUENCE, STRAIN=750
PubMed=8953713;
Bhugaloo-Vial, P., Dousset, X., Metivier, A., Sorokine, O., Anglade, P., Boyaval, P., Marion, D.
"Purification and amino acid sequences of piscicocins V1a and V1b, two class IIa bacteriocins secreted by Carnobacterium piscicola V1 that display significantly different levels of specific inhibitory activity.", Appl Environ Microbiol 62 (12):4410-6 (1996).
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Protein sequence
 ........10 ........20 ........30 ........40 ........50 
          |          |          |          |          | 
 KYYGNGVSCN KNGCTVDWSK AIGIIGNNAA ANLTTGGAAG WNKG

Wheel representation
wheel representation of Pisciocin V1a
Composition
Hydrophobicity

Composition
Formula C190 H295 N57 O61 S2
Absent amino acids EFHMPQR
Common amino acids G
Mass (Da) 4436.66
Net charge +3
Isoelectric point 9.33
Basic residues 4
Acidic residues 1
Hydrophobic residues 14
Polar residues 25
Aliphatic residues 6
Tiny residues 17
Boman Index -37.89
Hydropathy Index -0.31
Aliphatic Index 62.27
Instability Index 22.82 (stable)
Half Life Mammalian : 1.3 hour
Yeast : 3 min
E. coli : 2 min
Extinction Coefficient 14105 M-1 cm-1
Absorbance 280nm 328.02

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