Bavaricin-MN

Accession: BAC067

Default view

Bacteriocin: bavaricin-MN

Accession: BAC067

Classification

Class: class IIA/YGNGV

Genetics

Gene: ~~Unidentified~~

Producer and target organisms

Producer Organism: Lactobacillus sakei [Gram-positive]

Taxonomy: BacteriaFirmicutesLactobacillalesLactobacillaceaeLactobacillus

Target organismsListeria monocytogenes Scott A-

Related Entries

bavaricin-A

Uniprot and PDB links

UniProt Entry: P80493

PDB Entry~~Unknown~~

[Ref. 1] | View abstract | Export citation

PROTEIN SEQUENCE, STRAIN=MN
MEDLINE=97111988;PubMed=8953724;
Kaiser A.L., Montville T.J.
"Purification of the bacteriocin bavaricin MN and characterization of its mode of action against Listeria monocytogenes Scott A cells and lipid vesicles.", Appl. Environ. Microbiol. 62:4529-4535(1996).

Protein sequence

........10 ........20 ........30 ........40 ........50
| | | | |
TKYYGNGVYC NSKKCWVDWG QAAGGIGQTV VXGWLGGAIP GK

Wheel representation

Protein sequence annotations

Feature	Position(s)	Length	Description
PEPTIDE	1↔42	42	Bacteriocin bavaricin-MN. Feature identifier = PRO_0000110574.
DISULFID	10↔15	6	By similarity.
UNSURE	10
UNSURE	15

Composition

Amino acid	Count	Percent
A	3	7.14 %
C	2	4.76 %
D	1	2.38 %
E	0	0.00 %
F	0	0.00 %
G	10	23.81 %
H	0	0.00 %
I	2	4.76 %
K	4	9.52 %
L	1	2.38 %
M	0	0.00 %
N	2	4.76 %
P	1	2.38 %
Q	2	4.76 %
R	0	0.00 %
S	1	2.38 %
T	2	4.76 %
V	4	9.52 %
W	3	7.14 %
Y	3	7.14 %

Hydrophobicity

warning: X is not a standard amino acid. warning: X is not a standard amino acid.

Composition

Formula	C₁₉₅ H₂₈₈ N₅₂ O₅₃ S₂
Absent amino acids	EFHMR
Common amino acids	G
Mass (Da)	4401.59
Net charge	+3
Isoelectric point	9.25
Basic residues	4
Acidic residues	1
Hydrophobic residues	13
Polar residues	20
Aliphatic residues	7
Tiny residues	14
Boman Index	-8.94
Hydropathy Index	-0.18
Aliphatic Index	62.62
Instability Index	5.38 (stable)
Half Life	Mammalian : 7.2 hour Yeast : >20 hour E. coli : >10 hour
Extinction Coefficient	21095 M^-1 cm^-1
Absorbance 280nm	514.51