Bacteriocin: Butyrivibriocin AR10

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Bacteriocin: Butyrivibriocin AR10

Accession: BAC165

Classification
Class: Unclassified
Genetics
Gene: bviA
Uniprot and PDB links

UniProt Entry: Q9ZGP5

PDB EntryUnknown

NUCLEOTIDE SEQUENCE.STRAIN=AR10
PubMed=15162201;DOI=10.1139/w03-101
Kalmokoff M.L., Cyr T.D., Hefford M.A., Whitford M.F., Teather R.M.
"Butyrivibriocin AR10, a new cyclic bacteriocin produced by theruminal anaerobe Butyrivibrio fibrisolvens AR10: characterization ofthe gene and peptide.", Can. J. Microbiol. 49:763-773(2003)

PubMed=15162201;
Kalmokoff ML, Cyr TD, Hefford MA, Whitford MF, Teather RM.
"Butyrivibriocin AR10, a new cyclic bacteriocin produced by the ruminal anaerobe Butyrivibrio fibrisolvens AR10: characterization of the gene and peptide", Can J Microbiol. 49(12):763-773(2003)

PubMed=9023920;
Kalmokoff ML, Teather RM.
"Isolation and characterization of a bacteriocin (Butyrivibriocin AR10) from the ruminal anaerobe Butyrivibrio fibrisolvens AR10: evidence in support of the widespread occurrence of bacteriocin-like activity among ruminal isolates of B. fibrisolvens", Appl Environ Microbiol. 63(2):394-402(1997)
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Gene structure
genome of Butyrivibriocin AR10

Gene idNameDescriptionLocation
BACGene758response regulator-like protein ORF1467..1183
BACGene759histidine kinase-like protein ORF21342..2514
BACGene760bviBATP binding protein BviB3047..3889
BACGene761bviCBviB3891..4541
BACGene762bviDBviC4560..4721
BACGene763bviAbutyrivibriocin AR10 bacteriocin4778..5020
BACGene764bviEBviE5121..5621
BACGene765bviEunknown ORF85678..6058
bviBbviCbviDbviAbviEbviE
Protein sequence
 ........10 ........20 ........30 ........40 ........50 ........60 
          |          |          |          |          |          | 
 IYFIADKMGI QLAPAWYQDI VNWVSAGGTL TTGFAIIVGV TVPAWIAEAA AAFGIASA

Wheel representation
wheel representation of Butyrivibriocin AR10
Composition
Hydrophobicity

Composition
Formula C284 H427 N65 O76 S1
Absent amino acids CHR
Common amino acids A
Mass (Da) 6019
Net charge -2
Isoelectric point 3.88
Basic residues 1
Acidic residues 3
Hydrophobic residues 34
Polar residues 15
Aliphatic residues 15
Tiny residues 21
Boman Index 51.97
Hydropathy Index 1
Aliphatic Index 114.66
Instability Index 16.29 (stable)
Half Life Mammalian : 20 hour
Yeast : 30 min
E. coli : >10 hour
Extinction Coefficient 19480 M-1 cm-1
Absorbance 280nm 341.75

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