Bacteriocin: Nisin F

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Bacteriocin: Nisin F

Accession: BAC146

Classification
Class: Lantibiotic
Genetics
Gene: BacF
Description
under review
Uniprot and PDB links

UniProt Entry: A7UGI5

PDB EntryUnknown

GENE SEQUENCEE
PubMed=18039827;DOI=10.1128/AEM.01862-07
de Kwaadsteniet M, Ten Doeschate K, Dicks L M T.
"Characterization of the Structural Gene Encoding Nisin F, a New Lantibiotic Produced by a Lactococcus lactis subsp. lactis Isolate from Freshwater Catfish (Clarias gariepinus)", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74(2):547-549.
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Gene structure
genome of Nisin F

Gene idNameDescriptionLocation
BACGene653nisin F1..171
Protein sequence
 ........10 ........20 ........30 ........40 
          |          |          |          | 
 ITSISLCTPG CKTGALMGCN MKTATCNCSV HVSK

Wheel representation
wheel representation of Nisin F
Composition
Hydrophobicity

Composition
Formula C140 H243 N41 O46 S7
Absent amino acids DEFQRWY
Common amino acids CT
Mass (Da) 3479.71
Net charge +4
Isoelectric point 8.51
Basic residues 4
Acidic residues 0
Hydrophobic residues 8
Polar residues 19
Aliphatic residues 6
Tiny residues 9
Boman Index -15.74
Hydropathy Index 0.4
Aliphatic Index 68.82
Instability Index 13.45 (stable)
Half Life Mammalian : 20 hour
Yeast : 30 min
E. coli : >10 hour
Extinction Coefficient 0 M-1 cm-1
Absorbance 280nm 7.58

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