Bacteriocin: Penocin A

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UniProt Entry: Q03HX9

PDB EntryUnknown

PROTEIN SEQUENCE, STRAIN=ATCC 25745
PubMed=16735728;DOI=10.1099/mic.0.28794-0
Diep DB, Godager L, Brede D, Nes IF.
"Data mining and characterization of a novel pediocin-like bacteriocin system from the genome of Pediococcus pentosaceus ATCC 25745.", Microbiology. 2006 Jun;152(Pt 6):1649-59.
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Protein sequence
 ........10 ........20 ........30 ........40 ........50 
          |          |          |          |          | 
 KYYGNGVHCG KKTCYVDWGQ ATASIGKIIV NGWTQHGPWA HR

Wheel representation
wheel representation of Penocin A
Composition
Hydrophobicity

Composition
Formula C212 H312 N62 O56 S2
Absent amino acids EFLM
Common amino acids G
Mass (Da) 4684.6
Net charge +7
Isoelectric point 9.45
Basic residues 8
Acidic residues 1
Hydrophobic residues 12
Polar residues 18
Aliphatic residues 6
Tiny residues 11
Boman Index -47.27
Hydropathy Index -0.586
Aliphatic Index 7.93
Instability Index -23.82 (stable)
Half Life Mammalian : 1.3 hour
Yeast : 3 min
E. coli : 2 min
Extinction Coefficient 21095 M-1 cm-1
Absorbance 280nm 514.51

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