Bacteriocin: Acidocin A

Default view

Bacteriocin: Acidocin A

Accession: BAC107

Classification
Genetics
Gene: acdA
Uniprot and PDB links

UniProt Entry: Q48496

PDB EntryUnknown

NUCLEOTIDE SEQUENCE, STRAIN=TK9201
MEDLINE=95314239;PubMed=7793908;
Kanatani K., Oshimura M., Sano K.
"Isolation and characterization of acidocin A and cloning of the bacteriocin gene from Lactobacillus acidophilus.", Appl. Environ. Microbiol. 61:1061-1067(1995).
Loading...
End Note
Reference Manager
BibTeX
Gene structure
genome of Acidocin A

Gene idNameDescriptionLocation
BACGene497acdAacidocin A bacteriocin142..387
BACGene498acdAORF2 unknown416..583
acdAacdA
Protein sequence
 ........10 ........20 ........30 ........40 ........50 ........60 
          |          |          |          |          |          | 
 KTYYGTNGVH CTKKSLWGKV RLKNVIPGTL CRKQSLPIKQ DLKILLGWAT GAFGKTFH

Wheel representation
wheel representation of Acidocin A
Protein sequence annotations
Features of Acidocin A


FeaturePosition(s)LengthDescription
CHAIN1↔5858
mature acidocin A.
Feature identifier = PRO_5000139827.
Composition
Hydrophobicity

Composition
Formula C299 H481 N83 O75 S2
Absent amino acids EM
Common amino acids K
Mass (Da) 6521.72
Net charge +12
Isoelectric point 10.94
Basic residues 13
Acidic residues 1
Hydrophobic residues 19
Polar residues 21
Aliphatic residues 13
Tiny residues 11
Boman Index -59.99
Hydropathy Index -0.3
Aliphatic Index 85.69
Instability Index 23.99 (stable)
Half Life Mammalian : 1.3 hour
Yeast : 3 min
E. coli : 2 min
Extinction Coefficient 14105 M-1 cm-1
Absorbance 280nm 247.46

Users comments for Acidocin A

No comments found

Login or register to submit a comment for Acidocin A.