Bacteriocin: Brochocin-c

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Bacteriocin: Brochocin-c

Accession: BAC093

Classification
Class: Unclassified
Genetics
Gene: brcA
Uniprot and PDB links

UniProt Entry: O85756

PDB EntryUnknown

NUCLEOTIDE SEQUENCE, STRAIN=ATCC43754
MEDLINE=99054910;PubMed=9835559;
McCormick J.K., Poon A., Sailer M., Gao Y., Roy K.L., McMullen L.M., Vederas J.C., Stiles M.E., Van Belkum M.J.
"Genetic characterization and heterologous expression of brochocin-C, an antibotulinal, two-peptide bacteriocin produced by Brochothrix campestris ATCC 43754.", Appl. Environ. Microbiol. 64:4757-4766(1998).
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Gene structure
genome of Brochocin-c

Gene idNameDescriptionLocation
BACGene380transposase ORF11..399
BACGene381ORF2417..716
BACGene382brcAbacteriocin BrcA; brochocin-C; antibotulinal1273..1506
BACGene383brcBbacteriocin BrcB; brochocin-C; antibotulinal1519..1701
BACGene384brcIbacteriocin immunity protein BrcI1695..1856
BACGene385brcDtransport accessory protein BrcD2059..2535
BACGene386brcTABC translocator BrcT2722..4357
brcAbrcBbrcIbrcDbrcT
Protein sequence
 ........10 ........20 ........30 ........40 ........50 
          |          |          |          |          | 
 YSSKDCLKDI GKGIGAGTVA GAAGGGLAAG LGAIPGAFVG AHFGVIGG

Wheel representation
wheel representation of Brochocin-c
Composition
Hydrophobicity

Composition
Formula C191 H305 N53 O57 S1
Absent amino acids EMNQRW
Common amino acids G
Mass (Da) 4306.77
Net charge +2
Isoelectric point 8.52
Basic residues 4
Acidic residues 2
Hydrophobic residues 21
Polar residues 20
Aliphatic residues 10
Tiny residues 26
Boman Index 35.93
Hydropathy Index 0.69
Aliphatic Index 93.75
Instability Index 1.54 (stable)
Half Life Mammalian : 2.8 hour
Yeast : 10 min
E. coli : 2 min
Extinction Coefficient 1490 M-1 cm-1
Absorbance 280nm 31.7

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