Bacteriocin: Coagulin A

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Bacteriocin: Coagulin A

Accession: BAC084

Classification
Class: Unclassified
Genetics
Gene: coaA
Uniprot and PDB links

UniProt Entry: Q9EZB2

PDB EntryUnknown

NUCLEOTIDE SEQUENCE, STRAIN=I4
MEDLINE=20551094;PubMed=11097892;DOI=10.1128/AEM.66.12.5213-5220.2000
Le Marrec C., Hyronimus B., Bressollier P., Verneuil B., Urdaci M.C.
"Biochemical and genetic characterization of coagulin, a new antilisterial bacteriocin in the pediocin family of bacteriocins, produced by Bacillus coagulans I(4).", Appl. Environ. Microbiol. 66:5213-5220(2000).
NUCLEOTIDE SEQUENCE, STRAIN=I4
Le Henaff-Le Marrec C., Hyronimus B., Bressolier P.
"", Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases.
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End Note
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BibTeX
Gene structure
genome of Coagulin A

Gene idNameDescriptionLocation
BACGene306coaACoaA pediocin-like bacteriocin; similar to PedA from Pediococcus acidilactici1089..1277
BACGene307coaBCoaB immunity protein; similar to PedB from Pediococcus acidilactici1315..1653
BACGene308coaCCoaC accessory protein; similar to PedC from Pediococcus acidilactici1677..2201
BACGene309coaDCoaD ABC transporter; similar to PedD from Pediococcus acidilactici2300..4474
BACGene310mob/preMob/Pre putative plasmid recombination enzyme; similar to various Mob/Pre proteins fromgram positive bacteria plasmidscomplement(4594..6018)
coaAcoaBcoaCcoaDmob/pre
Protein sequence
 ........10 ........20 ........30 ........40 ........50 
          |          |          |          |          | 
 KYYGNGVTCG KHSCSVDWGK ATTCIINNGA MAWATGGHQG THKC

Wheel representation
wheel representation of Coagulin A
Composition
Hydrophobicity

Composition
Formula C196 H298 N60 O60 S5
Absent amino acids EFLPR
Common amino acids G
Mass (Da) 4633.95
Net charge +6
Isoelectric point 8.67
Basic residues 7
Acidic residues 1
Hydrophobic residues 10
Polar residues 24
Aliphatic residues 4
Tiny residues 14
Boman Index -45.48
Hydropathy Index -0.43
Aliphatic Index 40
Instability Index -0.48 (stable)
Half Life Mammalian : 1.3 hour
Yeast : 3 min
E. coli : 2 min
Extinction Coefficient 14230 M-1 cm-1
Absorbance 280nm 330.93

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