Bacteriocin: Pisciocin V1b

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Bacteriocin: Pisciocin V1b

Accession: BAC075

Classification
Class: class IIa
Genetics
Gene: Pisciocin V1b
Uniprot and PDB links

UniProt Entry: No entry found

PDB EntryUnknown

NUCLEOTIDE SEQUENCE, STRAIN=750
PubMed=8953713;
Bhugaloo-Vial, P., Dousset, X., Metivier, A., Sorokine, O., Anglade, P., Boyaval, P., Marion, D.
"Purification and amino acid sequences of piscicocins V1a and V1b, two class IIa bacteriocins secreted by Carnobacterium piscicola V1 that display significantly different levels of specific inhibitory activity.", Appl Environ Microbiol 62 (12):4410-6 (1996).
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Protein sequence
 ........10 ........20 ........30 ........40 ........50 
          |          |          |          |          | 
 AISYGNGVYC NKEKCWVNKA ENKQAITGIV IGGWASSLAG MGH

Wheel representation
wheel representation of Pisciocin V1b
Composition
Hydrophobicity

Composition
Formula C199 H310 N56 O59 S3
Absent amino acids DFPR
Common amino acids G
Mass (Da) 4545.91
Net charge +3
Isoelectric point 8.76
Basic residues 5
Acidic residues 2
Hydrophobic residues 15
Polar residues 19
Aliphatic residues 8
Tiny residues 15
Boman Index -23.71
Hydropathy Index -0.08
Aliphatic Index 77.21
Instability Index 26.93 (stable)
Half Life Mammalian : 4.4 hour
Yeast : >20 hour
E. coli : >10 hour
Extinction Coefficient 14105 M-1 cm-1
Absorbance 280nm 335.83

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