Bacteriocin: plantaricin J

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NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRAIN=C11
MEDLINE=94161498;PubMed=8117074;
Diep B.D., Havarstein L.S., Nissen-Meyer J., Nes F.I.
"The gene encoding plantaricin A, a bacteriocin from Lactobacillus plantarum C11, is located on the same transcription unit as an agr- like regulatory system.", Appl. Environ. Microbiol. 60:160-166(1994).
NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRAIN=C11
MEDLINE=96345611;PubMed=8755874;
Diep D.B., Havarstein L.S., Nes I.F.
"Characterization of the locus responsible for the bacteriocin production in Lactobacillus plantarum C11.", J. Bacteriol. 178:4472-4483(1996).
NUCLEOTIDE SEQUENCE, STRAIN=C11
MEDLINE=96414465;PubMed=8817486;
Diep D.B., Haavarstein S.L., Nes I.F.
"A bacteriocin-like peptide induces bacteriocin synthesis in Lactobacillus plantarum C11.", Mol. Microbiol. 18:631-639(1995).
NUCLEOTIDE SEQUENCE, STRAIN=NC8
PubMed=14973042;DOI=10.1128/JB.186.5.1556-1564.2004
Maldonado A., Jimenez-Diaz R., Ruiz-Barba J.L.
"Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism.", J. Bacteriol. 186:1556-1564(2004).
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Protein sequence
 ........10 ........20 ........30 
          |          |          | 
 GAWKNFWSSL RKGFYDGEAG RAIRR

Wheel representation
wheel representation of plantaricin J
3D Structure
Protein sequence annotations
Features of plantaricin J


FeaturePosition(s)LengthDescription
CHAIN1↔2525
bacteriocin peptide J.
Feature identifier = PRO_5000146711.
CHAIN1↔2525
bacteriocin peptide PlnJ.
Feature identifier = PRO_5000063930.
Composition
Hydrophobicity

Composition
Formula C133 H198 N42 O34
Absent amino acids CHMPQTV
Common amino acids GR
Mass (Da) 2947.69
Net charge +4
Isoelectric point 11.51
Basic residues 6
Acidic residues 2
Hydrophobic residues 9
Polar residues 8
Aliphatic residues 2
Tiny residues 9
Boman Index -70.24
Hydropathy Index -0.93
Aliphatic Index 43.2
Instability Index 54.61 (unstable)
Half Life Mammalian : 30 hour
Yeast : >20 hour
E. coli : >10 hour
Extinction Coefficient 12490 M-1 cm-1
Absorbance 280nm 520.42

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