Bacteriocin: plantaricin J
Accession: BAC027
Classification
Class: Class IIb
Genetics
Gene: plnJ; OrderedLocusNames=lp_0406
Producer and target organisms
Producer Organism: Lactobacillus plantarum [Gram-positive]
Taxonomy: BacteriaFirmicutes
Lactobacillales
Lactobacillaceae
Lactobacillus
Target organismsUnavailable data
Uniprot and PDB links
NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRAIN=C11
MEDLINE=94161498;PubMed=8117074;
Diep B.D., Havarstein L.S., Nissen-Meyer J., Nes F.I.
"The gene encoding plantaricin A, a bacteriocin from Lactobacillus plantarum C11, is located on the same transcription unit as an agr- like regulatory system.", Appl. Environ. Microbiol. 60:160-166(1994).
MEDLINE=94161498;PubMed=8117074;
Diep B.D., Havarstein L.S., Nissen-Meyer J., Nes F.I.
"The gene encoding plantaricin A, a bacteriocin from Lactobacillus plantarum C11, is located on the same transcription unit as an agr- like regulatory system.", Appl. Environ. Microbiol. 60:160-166(1994).
NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRAIN=C11
MEDLINE=96345611;PubMed=8755874;
Diep D.B., Havarstein L.S., Nes I.F.
"Characterization of the locus responsible for the bacteriocin production in Lactobacillus plantarum C11.", J. Bacteriol. 178:4472-4483(1996).
MEDLINE=96345611;PubMed=8755874;
Diep D.B., Havarstein L.S., Nes I.F.
"Characterization of the locus responsible for the bacteriocin production in Lactobacillus plantarum C11.", J. Bacteriol. 178:4472-4483(1996).
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], STRAIN=NCIMB 8826 / WCFS1
MEDLINE=22480296;PubMed=12566566;DOI=10.1073/pnas.0337704100
Kleerebezem M., Boekhorst J., van Kranenburg R., Molenaar D., Kuipers O.P., Leer R., Tarchini R., Peters S.A., Sandbrink H.M., Fiers M.W.E.J., Stiekema W., Klein Lankhorst R.M., Bron P.A., Hoffer S.M., Nierop Groot M.N., Kerkhoven R., De Vries M., Ursing
"Complete genome sequence of Lactobacillus plantarum WCFS1", Proc. Natl. Acad. Sci. U.S.A. 100 (4):1990-5 (2003).
MEDLINE=22480296;PubMed=12566566;DOI=10.1073/pnas.0337704100
Kleerebezem M., Boekhorst J., van Kranenburg R., Molenaar D., Kuipers O.P., Leer R., Tarchini R., Peters S.A., Sandbrink H.M., Fiers M.W.E.J., Stiekema W., Klein Lankhorst R.M., Bron P.A., Hoffer S.M., Nierop Groot M.N., Kerkhoven R., De Vries M., Ursing
"Complete genome sequence of Lactobacillus plantarum WCFS1", Proc. Natl. Acad. Sci. U.S.A. 100 (4):1990-5 (2003).
NUCLEOTIDE SEQUENCE, STRAIN=C11
MEDLINE=96414465;PubMed=8817486;
Diep D.B., Haavarstein S.L., Nes I.F.
"A bacteriocin-like peptide induces bacteriocin synthesis in Lactobacillus plantarum C11.", Mol. Microbiol. 18:631-639(1995).
MEDLINE=96414465;PubMed=8817486;
Diep D.B., Haavarstein S.L., Nes I.F.
"A bacteriocin-like peptide induces bacteriocin synthesis in Lactobacillus plantarum C11.", Mol. Microbiol. 18:631-639(1995).
NUCLEOTIDE SEQUENCE, STRAIN=NC8
PubMed=14973042;DOI=10.1128/JB.186.5.1556-1564.2004
Maldonado A., Jimenez-Diaz R., Ruiz-Barba J.L.
"Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism.", J. Bacteriol. 186:1556-1564(2004).
PubMed=14973042;DOI=10.1128/JB.186.5.1556-1564.2004
Maldonado A., Jimenez-Diaz R., Ruiz-Barba J.L.
"Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism.", J. Bacteriol. 186:1556-1564(2004).
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Protein sequence
........10 ........20 ........30 | | | GAWKNFWSSL RKGFYDGEAG RAIRR |
Wheel representation
3D Structure
Protein sequence annotations
Feature | Position(s) | Length | Description |
CHAIN | 1↔25 | 25 | bacteriocin peptide J. Feature identifier = PRO_5000146711. |
CHAIN | 1↔25 | 25 | bacteriocin peptide PlnJ. Feature identifier = PRO_5000063930. |
Composition
Hydrophobicity
Composition
Formula | C133
H198
N42
O34
|
Absent amino acids | CHMPQTV |
Common amino acids | GR |
Mass (Da) | 2947.69 |
Net charge | +4 |
Isoelectric point | 11.51 |
Basic residues | 6 |
Acidic residues | 2 |
Hydrophobic residues | 9 |
Polar residues | 8 |
Aliphatic residues | 2 |
Tiny residues | 9 |
Boman Index | -70.24 |
Hydropathy Index | -0.93 |
Aliphatic Index | 43.2 |
Instability Index | 54.61 (unstable) |
Half Life |
Mammalian : 30 hour Yeast : >20 hour E. coli : >10 hour |
Extinction Coefficient | 12490 M-1 cm-1 |
Absorbance 280nm | 520.42 |
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