Bacteriocin: Acidocin J1132 β
Accession: BAC024
Classification
Class: Class IIb
Genetics
Gene: Unidentified
Producer and target organisms
Producer Organism: Lactobacillus acidophilus [Gram-positive]
Taxonomy: Bacteria
FirmicutesLactobacillalesLactobacillaceaeLactobacillus
Target organismsLactobacillus
Uniprot and PDB links
UniProt Entry: Q9R499
PDB EntryUnknown
PROTEIN SEQUENCE.
MEDLINE=97076919;PubMed=8975617;
Tahara T., Oshimura M., Umezawa C., Kanatani K.
"Isolation, partial characterization, and mode of action of Acidocin J1132, a two-component bacteriocin produced by Lactobacillus acidophilus JCM 1132.", Appl. Environ. Microbiol. 62:892-897(1996).
MEDLINE=97076919;PubMed=8975617;
Tahara T., Oshimura M., Umezawa C., Kanatani K.
"Isolation, partial characterization, and mode of action of Acidocin J1132, a two-component bacteriocin produced by Lactobacillus acidophilus JCM 1132.", Appl. Environ. Microbiol. 62:892-897(1996).
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Protein sequence
| ........10 ........20 ........30 | | | GNPKVAHCAS QIGRSTAWGA VSGA |
Wheel representation
Composition
Hydrophobicity
Composition
| Formula | C98
H157
N33
O31
S1 |
| Absent amino acids | DEFLMY |
| Common amino acids | A |
| Mass (Da) | 2343.99 |
| Net charge | +3 |
| Isoelectric point | 9.83 |
| Basic residues | 3 |
| Acidic residues | 0 |
| Hydrophobic residues | 9 |
| Polar residues | 10 |
| Aliphatic residues | 3 |
| Tiny residues | 12 |
| Boman Index | -20.66 |
| Hydropathy Index | -0.06 |
| Aliphatic Index | 61.25 |
| Instability Index | 12.71 (stable) |
| Half Life |
Mammalian : 30 hour Yeast : >20 hour E. coli : >10 hour |
| Extinction Coefficient | 5500 M-1 cm-1 |
| Absorbance 280nm | 239.13 |
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