Bacteriocin: Subpeptin JM4-B

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Bacteriocin: Subpeptin JM4-B

Accession: BAC006

Classification
Class: Unclassified
Genetics
Gene: Unidentified
Description
Mode of action:
maximum activity is reached at the stationary phase. NOTE=Ref.1.
Uniprot and PDB links

UniProt Entry: P83879

PDB EntryUnknown

PROTEIN SEQUENCE, FUNCTION, SUBUNIT, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE, AND MASS SPECTROMETRY, STRAIN=JM4
Wu S.-M., Sun D.-D., Jia S.-F., Chen M.-L., Huan L.-D.
"Purification and characterization of two novel antimicrobial peptides.", Submitted (MAR-2004) to Swiss-Prot.
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Protein sequence
 ........10 ........20 
          |          | 
 XXKEIXHIFH DN

Wheel representation
wheel representation of Subpeptin JM4-B
Protein sequence annotations
Features of Subpeptin JM4-B


FeaturePosition(s)LengthDescription
PEPTIDE1↔1212
Subpeptin JM4-B.
Feature identifier = PRO_0000044153.
Composition
Hydrophobicity
warning: X is not a standard amino acid. warning: X is not a standard amino acid.

Composition
Formula C52 H71 N15 O12
Absent amino acids ACGLMPQRSTVWY
Common amino acids X
Mass (Da) 1446.42
Net charge +1
Isoelectric point 6.5
Basic residues 3
Acidic residues 2
Hydrophobic residues 3
Polar residues 1
Aliphatic residues 2
Tiny residues 0
Boman Index -24.22
Hydropathy Index -0.75
Aliphatic Index 65
Instability Index 58.5 (unstable)
Extinction Coefficient 0 M-1 cm-1
Absorbance 280nm 0

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