Bacteriocin: serracin-P

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Bacteriocin: serracin-P

Accession: BAC002

Classification
Genetics
Gene: Unidentified
Producer and target organisms
Description
Mode of action:
Major component of a prophage tail sheath (Probable).
Uniprot and PDB links

UniProt Entry: P83375

PDB EntryUnknown

PROTEIN SEQUENCE, AND FUNCTION, STRAIN=J7
MEDLINE=22293561;PubMed=12406768;
Jabrane A., Sabri A., Compere P., Jacques P., Vandenberghe I., Van Beeumen J., Thonart P.
"Characterization of serracin P, a phage-tail-like bacteriocin, and its activity against Erwinia amylovora, the fire blight pathogen.", Appl. Environ. Microbiol. 68:5704-5710(2002).
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Protein sequence
 ........10 
          | 
 DYHHGVRVL

Warning: N-terminal amino acid sequence of the 43-kDa serracin P subunit.

Wheel representation
wheel representation of serracin-P
Protein sequence annotations
Features of serracin-P


FeaturePosition(s)LengthDescription
CHAIN1
Bacteriocin serracin-P 43 kDa subunit.
Feature identifier = PRO_0000110582.
NON_TER9
Composition
Hydrophobicity

Composition
Formula C49 H74 N16 O13
Absent amino acids ACEFIKMNPQSTW
Common amino acids HV
Mass (Da) 1113.37
Net charge +2
Isoelectric point 7.71
Basic residues 3
Acidic residues 1
Hydrophobic residues 3
Polar residues 2
Aliphatic residues 3
Tiny residues 1
Boman Index -19.16
Hydropathy Index -0.43
Aliphatic Index 107.78
Instability Index 11.08 (stable)
Half Life Mammalian : 1.1 hour
Yeast : 3 min
E. coli : >10 hour
Extinction Coefficient 1490 M-1 cm-1
Absorbance 280nm 186.25

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