Bacteriocin: serracin-P
Accession: BAC002
Classification
Class: Phage-Tail-Like
Genetics
Gene: Unidentified
Producer and target organisms
Producer Organism: Serratia plymuthica [Gram-negative]
Taxonomy: BacteriaProteobacteria
Gammaproteobacteria
Enterobacteriales
Enterobacteriaceae
Serratia
Description
Mode of action:
Major component of a prophage tail sheath (Probable).
Major component of a prophage tail sheath (Probable).
Uniprot and PDB links
UniProt Entry: P83375
PDB EntryUnknown
PROTEIN SEQUENCE, AND FUNCTION, STRAIN=J7
MEDLINE=22293561;PubMed=12406768;
Jabrane A., Sabri A., Compere P., Jacques P., Vandenberghe I., Van Beeumen J., Thonart P.
"Characterization of serracin P, a phage-tail-like bacteriocin, and its activity against Erwinia amylovora, the fire blight pathogen.", Appl. Environ. Microbiol. 68:5704-5710(2002).
MEDLINE=22293561;PubMed=12406768;
Jabrane A., Sabri A., Compere P., Jacques P., Vandenberghe I., Van Beeumen J., Thonart P.
"Characterization of serracin P, a phage-tail-like bacteriocin, and its activity against Erwinia amylovora, the fire blight pathogen.", Appl. Environ. Microbiol. 68:5704-5710(2002).
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Protein sequence
........10 | DYHHGVRVL |
Warning: N-terminal amino acid sequence of the 43-kDa serracin P subunit.
Wheel representation
Protein sequence annotations
Feature | Position(s) | Length | Description |
CHAIN | 1 | Bacteriocin serracin-P 43 kDa subunit. Feature identifier = PRO_0000110582. | |
NON_TER | 9 |
Composition
Hydrophobicity
Composition
Formula | C49
H74
N16
O13
|
Absent amino acids | ACEFIKMNPQSTW |
Common amino acids | HV |
Mass (Da) | 1113.37 |
Net charge | +2 |
Isoelectric point | 7.71 |
Basic residues | 3 |
Acidic residues | 1 |
Hydrophobic residues | 3 |
Polar residues | 2 |
Aliphatic residues | 3 |
Tiny residues | 1 |
Boman Index | -19.16 |
Hydropathy Index | -0.43 |
Aliphatic Index | 107.78 |
Instability Index | 11.08 (stable) |
Half Life |
Mammalian : 1.1 hour Yeast : 3 min E. coli : >10 hour |
Extinction Coefficient | 1490 M-1 cm-1 |
Absorbance 280nm | 186.25 |
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